STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA69406.1Hypothetical protein. (170 aa)    
Predicted Functional Partners:
SKA60966.1
Hypothetical protein.
  
     0.650
SKA73445.1
Hypothetical protein.
  
     0.647
SKA68335.1
Hypothetical protein.
  
     0.606
SKA69403.1
Bacteriophage abortive infection AbiH.
       0.598
SKA69400.1
Ig-like domain (group 2).
       0.586
SKA66270.1
Acetyltransferase (GNAT) domain-containing protein.
  
     0.548
SKA69398.1
Hypothetical protein.
       0.541
SKA69413.1
Ig-like domain (group 2).
 
     0.536
SKA69409.1
Ig-like domain (group 2).
 
     0.529
SKA69002.1
Fur family transcriptional regulator, ferric uptake regulator.
  
     0.489
Your Current Organism:
Eubacterium uniforme
NCBI taxonomy Id: 39495
Other names: ATCC 35992, E. uniforme, strain X3C39
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.