STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA71244.1S-layer homology domain-containing protein. (809 aa)    
Predicted Functional Partners:
SKA69942.1
Protein of unknown function.
  
     0.612
SKA61865.1
ABC-type transport system, involved in lipoprotein release, permease component.
  
     0.582
SKA60178.1
FtsX-like permease family protein.
  
     0.560
SKA69010.1
Leucine rich repeat-containing protein.
  
     0.532
SKA65729.1
Enterochelin esterase.
  
    0.529
SKA63376.1
Putative ABC transport system permease protein.
  
     0.505
SKA71012.1
Acetyltransferase (GNAT) domain-containing protein.
  
     0.477
SKA72123.1
Leucine rich repeat-containing protein.
  
     0.473
SKA65365.1
Leucine rich repeat-containing protein.
  
    0.459
SKA68419.1
Leucine rich repeat-containing protein.
  
     0.456
Your Current Organism:
Eubacterium uniforme
NCBI taxonomy Id: 39495
Other names: ATCC 35992, E. uniforme, strain X3C39
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.