STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bmul_3902TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305; KEGG: bur:Bcep18194_B0974 protein of unknown function DUF1305 (358 aa)    
Predicted Functional Partners:
Bmul_3903
TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879; KEGG: bur:Bcep18194_B0975 protein of unknown function DUF879
  
 0.973
Bmul_3901
PFAM: ImpA domain protein; KEGG: bur:Bcep18194_B0973 ImpA-like protein
 
  
 0.969
Bmul_3904
Uncharacterized protein; TIGRFAM: type VI secretion system lysozyme-related protein; PFAM: GPW/gp25 family protein; KEGG: bur:Bcep18194_B0976 protein of unknown function DUF1316
 
  
 0.952
Bmul_3913
TIGRFAM: type VI secretion protein, VC_A0114 family; PFAM: protein of unknown function DUF876; KEGG: bur:Bcep18194_B0984 protein of unknown function DUF876
 
  
 0.873
Bmul_3907
TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: conserved hypothetical protein; KEGG: bur:Bcep18194_B0980 hypothetical protein
 
  
 0.859
Bmul_3921
OmpA/MotB domain protein; TIGRFAM: type IV / VI secretion system protein, DotU family; type VI secretion system OmpA/MotB family protein; PFAM: OmpA/MotB domain protein; KEGG: bam:Bamb_3484 OmpA/MotB domain protein
 
  
 0.850
Bmul_3177
TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879; KEGG: bur:Bcep18194_B1828 protein of unknown function DUF879
  
 0.838
Bmul_3910
Probable lipoprotein; KEGG: bur:Bcep18194_B0983 hypothetical protein
 
  
 0.832
Bmul_3182
TIGRFAM: type VI secretion protein IcmF; PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: bur:Bcep18194_B1823 hypothetical protein
 
  
 0.827
Bmul_3908
TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877; KEGG: bur:Bcep18194_B0981 protein of unknown function DUF877
 
  
 0.827
Your Current Organism:
Burkholderia multivorans
NCBI taxonomy Id: 395019
Other names: B. multivorans ATCC 17616, Burkholderia multivorans, Burkholderia multivorans ATCC 17616, Burkholderia multivorans ATCC17616, Burkholderia multivorans str. ATCC 17616, Burkholderia multivorans strain ATCC 17616
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