STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACI53495.1PFAM: SCP-like extracellular; KEGG: rec:RHECIAT_CH0000612 hypothetical protein. (165 aa)    
Predicted Functional Partners:
ACI53496.1
KEGG: rec:RHECIAT_CH0000613 hypothetical protein.
       0.800
ACI53494.1
TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: rec:RHECIAT_CH0000611 DNA-damage-inducible F protein (Na+ driven multidrug efflux pump).
       0.705
ACI56455.1
TIGRFAM: outer membrane adhesin like proteiin; KEGG: ret:RHE_CH03450 autoaggregation protein (adhering protein).
  
    0.672
ACI56328.1
TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: inner-membrane translocator; KEGG: rec:RHECIAT_CH0003558 probable UreA or short-chain amide ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
   
   0.602
ACI56338.1
PFAM: inner-membrane translocator; KEGG: ret:RHE_CH03325 amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
   
   0.602
ACI56452.1
PFAM: inner-membrane translocator; KEGG: rec:RHECIAT_CH0003685 probable branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
   
   0.602
ACI53497.1
Methyltransferase type 12; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; Methyltransferase type 12; KEGG: rec:RHECIAT_CH0000614 probable methyltransferase protein.
 
     0.579
Your Current Organism:
Rhizobium leguminosarum
NCBI taxonomy Id: 395492
Other names: R. leguminosarum bv. trifolii WSM2304, Rhizobium leguminosarum bv. trifolii WSM2304, Rhizobium leguminosarum bv. trifolii str. WSM2304, Rhizobium leguminosarum bv. trifolii strain WSM2304
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