STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACI53547.1Type I secretion system ATPase; KEGG: rec:RHECIAT_CH0000668 putative protein ABC transporter protein; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; SMART: AAA ATPase. (571 aa)    
Predicted Functional Partners:
ACI53546.1
TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: rec:RHECIAT_CH0000667 putative protein secretion protein, HlyD family.
  
 0.946
ACI56244.1
TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: ret:RHE_CH03228 protein secretion protein, HlyD family.
  
 0.798
ACI57257.1
TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: atc:AGR_L_2998 alkaline proteinase secretion protein.
  
 0.797
ACI53545.1
PFAM: transposase IS3/IS911 family protein; KEGG: gdi:GDI1077 putative transposase.
  
    0.747
recF
DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP.
      
 0.733
ACI55485.1
PFAM: Hemolysin-type calcium-binding region; Cadherin; KEGG: rec:RHECIAT_PC0000856 putative hemolysin-type calcium-binding protein.
 
 
 0.690
ACI55486.1
Cadherin; PFAM: Hemolysin-type calcium-binding region; Cadherin; KEGG: rec:RHECIAT_PC0000856 putative hemolysin-type calcium-binding protein.
 
 
 0.679
ACI54997.1
KEGG: pfo:PflO1_1509 hemolysin-type calcium-binding region.
 
   
 0.670
ACI53548.1
KEGG: rec:RHECIAT_CH0000669 hypothetical protein.
       0.536
ACI54844.1
PFAM: Hemolysin-type calcium-binding region; KEGG: ret:RHE_CH01892 putative RTX toxin hemolysin-type calcium-binding protein.
 
 
 0.514
Your Current Organism:
Rhizobium leguminosarum
NCBI taxonomy Id: 395492
Other names: R. leguminosarum bv. trifolii WSM2304, Rhizobium leguminosarum bv. trifolii WSM2304, Rhizobium leguminosarum bv. trifolii str. WSM2304, Rhizobium leguminosarum bv. trifolii strain WSM2304
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