STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACI53989.1KEGG: rec:RHECIAT_CH0001135 hypothetical protein. (75 aa)    
Predicted Functional Partners:
ACI53990.1
KEGG: rec:RHECIAT_CH0001136 hypothetical protein.
       0.650
ACI53991.1
KEGG: ret:RHE_CH01036 hypothetical protein.
       0.650
ACI53992.1
Hypothetical protein; KEGG: smd:Smed_0126 GcrA cell cycle regulator.
       0.648
ACI53993.1
Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; KEGG: ret:RHE_CH01037 putative transcriptional regulator protein, LuxR family.
       0.648
ACI53994.1
KEGG: rec:RHECIAT_CH0001139 hypothetical protein.
       0.623
ACI53988.1
KEGG: rec:RHECIAT_CH0001134 hypothetical protein.
       0.439
Your Current Organism:
Rhizobium leguminosarum
NCBI taxonomy Id: 395492
Other names: R. leguminosarum bv. trifolii WSM2304, Rhizobium leguminosarum bv. trifolii WSM2304, Rhizobium leguminosarum bv. trifolii str. WSM2304, Rhizobium leguminosarum bv. trifolii strain WSM2304
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