STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACI54012.1Transcriptional regulator, TetR family; PFAM: regulatory protein TetR; Tetracyclin repressor domain protein; KEGG: sme:SMc01715 hypothetical protein. (231 aa)    
Predicted Functional Partners:
ACI54013.1
PFAM: Endoribonuclease L-PSP; KEGG: sme:SMc01714 hypothetical protein.
 
     0.826
ACI54011.1
Hypothetical protein.
       0.655
ACI55684.1
KEGG: mlo:mlr8028 hypothetical protein.
  
     0.639
ACI55236.1
KEGG: rec:RHECIAT_CH0002412 hypothetical conserved membrane protein.
  
    0.560
ACI54816.1
KEGG: tfu:Tfu_1340 hypothetical protein.
  
     0.535
ACI55964.1
PFAM: aminoglycoside phosphotransferase; KEGG: ret:RHE_CH02947 putative aminoglycoside 3'-phosphotransferase protein; Belongs to the aminoglycoside phosphotransferase family.
  
   
 0.528
ACI55705.1
TIGRFAM: phage-associated protein, HI1409 family; PFAM: conserved hypothetical protein; KEGG: smd:Smed_1895 phage-associated protein, HI1409 family.
  
     0.519
ACI55218.1
KEGG: rec:RHECIAT_CH0002395 hypothetical protein.
  
     0.516
ACI57277.1
PFAM: extracellular solute-binding protein family 1; KEGG: ret:RHE_CH00082 probable sugar ABC transporter, substrate-binding protein.
  
     0.437
ACI57518.1
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rec:RHECIAT_CH0000287 putative haloacid dehydrogenase hydrolase protein.
  
     0.437
Your Current Organism:
Rhizobium leguminosarum
NCBI taxonomy Id: 395492
Other names: R. leguminosarum bv. trifolii WSM2304, Rhizobium leguminosarum bv. trifolii WSM2304, Rhizobium leguminosarum bv. trifolii str. WSM2304, Rhizobium leguminosarum bv. trifolii strain WSM2304
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