STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACI54237.1PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rec:RHECIAT_CH0001405 hypothetical protein. (204 aa)    
Predicted Functional Partners:
ACI55900.1
PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: ret:RHE_CH02882 hypothetical protein.
  
     0.659
ACI54696.1
PFAM: Peptidoglycan-binding domain 1 protein; ErfK/YbiS/YcfS/YnhG family protein; KEGG: rec:RHECIAT_CH0001822 hypothetical protein.
  
     0.555
ACI57393.1
PFAM: peptidase U6 penicillin-insensitive murein endopeptidase; KEGG: ret:RHE_CH00174 penicillin-insensitive murein endopeptidase.
  
     0.498
ACI55252.1
PFAM: conserved hypothetical protein; KEGG: rec:RHECIAT_CH0002430 hypothetical conserved membrane protein.
  
     0.497
ACI54236.1
Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone.
       0.486
ACI53898.1
PFAM: Invasion associated locus B family protein; KEGG: ret:RHE_CH00951 hypothetical protein.
  
     0.483
ACI56867.1
PFAM: protein of unknown function DUF949; KEGG: rec:RHECIAT_CH0004100 hypothetical protein.
 
  
 0.435
ACI55251.1
PFAM: protein of unknown function DUF463 YcjX family protein; KEGG: rec:RHECIAT_CH0002429 hypothetical protein.
  
     0.429
ACI56200.1
PFAM: protein of unknown function DUF882; Peptidase M15A; KEGG: rec:RHECIAT_CH0003426 hypothetical protein.
 
     0.409
Your Current Organism:
Rhizobium leguminosarum
NCBI taxonomy Id: 395492
Other names: R. leguminosarum bv. trifolii WSM2304, Rhizobium leguminosarum bv. trifolii WSM2304, Rhizobium leguminosarum bv. trifolii str. WSM2304, Rhizobium leguminosarum bv. trifolii strain WSM2304
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.