STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACI54317.1PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0001481 putative ABC transporter, ATP-binding protein. (625 aa)    
Predicted Functional Partners:
psd
Phosphatidylserine decarboxylase related protein; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
       0.550
ACI56220.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0003440 putative surface saccharide ABC transporter, ATP-binding and permease protein.
  
 
0.530
ACI54318.1
PFAM: Peptidoglycan-binding LysM; KEGG: ret:RHE_CH01416 putative peptidoglycan binding protein (LysM domain involved in cell wall degradation).
       0.510
ACI55519.1
PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0002711 probable ABC transporter, ATP-binding protein.
  
 
0.508
ACI56516.1
KEGG: ret:RHE_CH03507 probable multidrug ABC transporter, ATP-binding protein; TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase.
  
 
0.499
ACI55845.1
PFAM: electron transport protein SCO1/SenC; KEGG: rec:RHECIAT_CH0002979 cytochrome c oxidase assembly factor protein.
  
     0.498
ACI56050.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ret:RHE_CH03040 probable ABC transporter, ATP-binding protein.
  
 
0.495
ndvA
Glucan exporter ATP-binding protein; Involved in Beta-(1-->2)glucan export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.
  
 
0.478
ACI56052.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0003201 probable ABC transporter, ATP-binding protein.
  
 
0.477
ACI57390.1
PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0000215 putative multidrug ABC transporter, ATPase and permease protein.
  
 
0.475
Your Current Organism:
Rhizobium leguminosarum
NCBI taxonomy Id: 395492
Other names: R. leguminosarum bv. trifolii WSM2304, Rhizobium leguminosarum bv. trifolii WSM2304, Rhizobium leguminosarum bv. trifolii str. WSM2304, Rhizobium leguminosarum bv. trifolii strain WSM2304
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