STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACI56476.1Hypothetical protein; KEGG: tcr:510377.134 mucin-associated surface protein (MASP), putative Pfam: Prosystemin PROSITE: ALA_RICH. (226 aa)    
Predicted Functional Partners:
ACI56474.1
PFAM: glycosyl transferase family 8; KEGG: rec:RHECIAT_CH0003708 glycosyltransferase protein (sulfolipid biosynthesis).
       0.603
ACI56475.1
PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; KEGG: rec:RHECIAT_CH0003709 sulfolipid biosynthesis protein.
       0.603
ACI56477.1
PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: ret:RHE_CH03471 probable 5-formyltetrahydrofolate cyclo-ligase protein; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
       0.504
ACI56478.1
PFAM: metallophosphoesterase; KEGG: rec:RHECIAT_CH0003711 putative phosphatase protein.
       0.504
Your Current Organism:
Rhizobium leguminosarum
NCBI taxonomy Id: 395492
Other names: R. leguminosarum bv. trifolii WSM2304, Rhizobium leguminosarum bv. trifolii WSM2304, Rhizobium leguminosarum bv. trifolii str. WSM2304, Rhizobium leguminosarum bv. trifolii strain WSM2304
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