STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACI56610.1PFAM: transglutaminase domain protein; transglutaminase domain protein; KEGG: rec:RHECIAT_CH0003856 putative transglutaminase-like protein. (1108 aa)    
Predicted Functional Partners:
ACI56611.1
PFAM: protein of unknown function DUF403; protein of unknown function DUF404; protein of unknown function DUF407; KEGG: rec:RHECIAT_CH0003857 hypothetical protein.
 
  
 0.960
ACI56612.1
PFAM: transglutaminase domain protein; transglutaminase domain protein; KEGG: ret:RHE_CH03591 putative transglutaminase-like protein.
 
    
0.793
ACI56169.1
PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: rec:RHECIAT_CH0003377 hypothetical protein.
 
  
 0.726
ACI55098.1
PFAM: transglutaminase domain protein; KEGG: rec:RHECIAT_CH0002255 putative transglutaminase-like protein.
 
     0.721
ACI56170.1
PFAM: protein of unknown function DUF403; KEGG: rec:RHECIAT_CH0003378 hypothetical protein.
 
  
 0.697
ACI53912.1
KEGG: rec:RHECIAT_CH0001059 hypothetical protein.
 
     0.631
ACI56608.1
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rec:RHECIAT_CH0003854 probable two-component response regulator protein.
       0.527
ACI56609.1
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Two-component sensor kinase domain protein; KEGG: ret:RHE_CH03588 probable two-component sensor histidine kinase protein.
       0.527
ACI56967.1
PFAM: glutamine amidotransferase class-I; KEGG: rec:RHECIAT_CH0004193 GMP synthase (glutamine-hydrolyzing) protein.
  
 
  0.517
ACI57509.1
PFAM: glutamine amidotransferase class-I; KEGG: ret:RHE_CH00245 putative glutamine amidotransferase protein.
  
 
  0.517
Your Current Organism:
Rhizobium leguminosarum
NCBI taxonomy Id: 395492
Other names: R. leguminosarum bv. trifolii WSM2304, Rhizobium leguminosarum bv. trifolii WSM2304, Rhizobium leguminosarum bv. trifolii str. WSM2304, Rhizobium leguminosarum bv. trifolii strain WSM2304
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