STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACI56852.1KEGG: ret:RHE_CH03815 hypothetical protein. (258 aa)    
Predicted Functional Partners:
ACI55194.1
KEGG: rec:RHECIAT_CH0002371 hypothetical protein.
  
     0.725
ACI55260.1
PFAM: Apolipoprotein A1/A4/E; KEGG: rec:RHECIAT_CH0002438 hypothetical protein.
  
     0.721
ACI55820.1
KEGG: rec:RHECIAT_CH0002947 hypothetical protein.
  
     0.719
ACI56851.1
PFAM: protein of unknown function DUF6 transmembrane; KEGG: ret:RHE_CH03814 hypothetical protein.
       0.713
ACI56557.1
PFAM: protein of unknown function DUF1036; KEGG: rec:RHECIAT_CH0003794 hypothetical protein.
  
     0.709
ACI56345.1
KEGG: rec:RHECIAT_CH0003577 hypothetical protein.
  
     0.701
ACI56514.1
PFAM: protein of unknown function DUF1465; KEGG: ret:RHE_CH03505 hypothetical protein.
  
     0.701
ACI54310.1
PFAM: conserved hypothetical protein; KEGG: rec:RHECIAT_CH0001475 hypothetical protein.
  
     0.700
ACI55129.1
KEGG: rec:RHECIAT_CH0002283 hypothetical protein.
  
     0.693
ACI54775.1
PFAM: Sporulation domain protein; KEGG: rec:RHECIAT_CH0001905 hypothetical protein.
  
     0.691
Your Current Organism:
Rhizobium leguminosarum
NCBI taxonomy Id: 395492
Other names: R. leguminosarum bv. trifolii WSM2304, Rhizobium leguminosarum bv. trifolii WSM2304, Rhizobium leguminosarum bv. trifolii str. WSM2304, Rhizobium leguminosarum bv. trifolii strain WSM2304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.