Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Galf_0392 | Galf_0898 | Galf_0392 | Galf_0898 | KEGG: slt:Slit_0402 protein serine/threonine phosphatase; PFAM: Stage II sporulation protein E; SMART: protein phosphatase 2C domain protein. | KEGG: bur:Bcep18194_C6602 hypothetical protein. | 0.422 |
Galf_0392 | Galf_0899 | Galf_0392 | Galf_0899 | KEGG: slt:Slit_0402 protein serine/threonine phosphatase; PFAM: Stage II sporulation protein E; SMART: protein phosphatase 2C domain protein. | KEGG: rcu:RCOM_2051300 hypothetical protein. | 0.422 |
Galf_0891 | Galf_0898 | Galf_0891 | Galf_0898 | PFAM: SMC domain protein; KEGG: pfo:Pfl01_2290 hypothetical protein. | KEGG: bur:Bcep18194_C6602 hypothetical protein. | 0.595 |
Galf_0891 | Galf_0899 | Galf_0891 | Galf_0899 | PFAM: SMC domain protein; KEGG: pfo:Pfl01_2290 hypothetical protein. | KEGG: rcu:RCOM_2051300 hypothetical protein. | 0.590 |
Galf_0897 | Galf_0898 | Galf_0897 | Galf_0898 | KEGG: xau:Xaut_0561 hypothetical protein. | KEGG: bur:Bcep18194_C6602 hypothetical protein. | 0.723 |
Galf_0897 | Galf_0899 | Galf_0897 | Galf_0899 | KEGG: xau:Xaut_0561 hypothetical protein. | KEGG: rcu:RCOM_2051300 hypothetical protein. | 0.642 |
Galf_0897 | Galf_0900 | Galf_0897 | Galf_0900 | KEGG: xau:Xaut_0561 hypothetical protein. | KEGG: bid:Bind_2001 hypothetical protein. | 0.656 |
Galf_0897 | Galf_0901 | Galf_0897 | Galf_0901 | KEGG: xau:Xaut_0561 hypothetical protein. | KEGG: fjo:Fjoh_3657 hypothetical protein. | 0.627 |
Galf_0897 | Galf_0902 | Galf_0897 | Galf_0902 | KEGG: xau:Xaut_0561 hypothetical protein. | KEGG: dfe:Dfer_4058 TonB family protein. | 0.610 |
Galf_0898 | Galf_0392 | Galf_0898 | Galf_0392 | KEGG: bur:Bcep18194_C6602 hypothetical protein. | KEGG: slt:Slit_0402 protein serine/threonine phosphatase; PFAM: Stage II sporulation protein E; SMART: protein phosphatase 2C domain protein. | 0.422 |
Galf_0898 | Galf_0891 | Galf_0898 | Galf_0891 | KEGG: bur:Bcep18194_C6602 hypothetical protein. | PFAM: SMC domain protein; KEGG: pfo:Pfl01_2290 hypothetical protein. | 0.595 |
Galf_0898 | Galf_0897 | Galf_0898 | Galf_0897 | KEGG: bur:Bcep18194_C6602 hypothetical protein. | KEGG: xau:Xaut_0561 hypothetical protein. | 0.723 |
Galf_0898 | Galf_0899 | Galf_0898 | Galf_0899 | KEGG: bur:Bcep18194_C6602 hypothetical protein. | KEGG: rcu:RCOM_2051300 hypothetical protein. | 0.713 |
Galf_0898 | Galf_0900 | Galf_0898 | Galf_0900 | KEGG: bur:Bcep18194_C6602 hypothetical protein. | KEGG: bid:Bind_2001 hypothetical protein. | 0.714 |
Galf_0898 | Galf_0901 | Galf_0898 | Galf_0901 | KEGG: bur:Bcep18194_C6602 hypothetical protein. | KEGG: fjo:Fjoh_3657 hypothetical protein. | 0.710 |
Galf_0898 | Galf_0902 | Galf_0898 | Galf_0902 | KEGG: bur:Bcep18194_C6602 hypothetical protein. | KEGG: dfe:Dfer_4058 TonB family protein. | 0.686 |
Galf_0898 | Galf_0931 | Galf_0898 | Galf_0931 | KEGG: bur:Bcep18194_C6602 hypothetical protein. | KEGG: ajs:Ajs_1872 hypothetical protein. | 0.422 |
Galf_0898 | gpsA | Galf_0898 | Galf_0224 | KEGG: bur:Bcep18194_C6602 hypothetical protein. | PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: slt:Slit_2610 glycerol-3-phosphate dehydrogenase (NAD(P)(+)); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.426 |
Galf_0898 | panD | Galf_0898 | Galf_2147 | KEGG: bur:Bcep18194_C6602 hypothetical protein. | Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. | 0.686 |
Galf_0899 | Galf_0392 | Galf_0899 | Galf_0392 | KEGG: rcu:RCOM_2051300 hypothetical protein. | KEGG: slt:Slit_0402 protein serine/threonine phosphatase; PFAM: Stage II sporulation protein E; SMART: protein phosphatase 2C domain protein. | 0.422 |
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