STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Galf_1027Anti-anti-sigma factor; KEGG: dar:Daro_0733 sulfate transporter/antisigma-factor antagonist STAS; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Belongs to the anti-sigma-factor antagonist family. (104 aa)    
Predicted Functional Partners:
Galf_1028
KEGG: cvi:CV_2644 two-component response regulator; PFAM: Stage II sporulation protein E; response regulator receiver; SMART: response regulator receiver; protein phosphatase 2C domain protein.
 
 0.999
Galf_2765
KEGG: lhk:LHK_00421 hypothetical protein.
  
 
 0.994
Galf_0537
PFAM: Mammalian cell entry related domain protein; KEGG: slt:Slit_0692 mammalian cell entry related domain protein.
  
   0.931
Galf_0536
PFAM: protein of unknown function DUF140; KEGG: slt:Slit_0691 protein of unknown function DUF140.
   
   0.930
Galf_1927
KEGG: rfr:Rfer_1602 hypothetical protein.
  
 
 0.927
Galf_1051
KEGG: slt:Slit_0573 flagellar rod assembly protein/muramidase FlgJ; TIGRFAM: flagellar rod assembly protein/muramidase FlgJ; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; Flagellar protein FlgJ-like.
  
    0.921
Galf_1038
KEGG: slt:Slit_0563 anti-sigma-28 factor, FlgM; TIGRFAM: Anti-sigma-28 factor FlgM family protein; PFAM: Anti-sigma-28 factor FlgM family protein.
  
  
  0.916
Galf_0762
Multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: dar:Daro_3006 PAS; SMART: ATP-binding region ATPase domain protein; response regulator receiver; PAS domain containing protein; PAC repeat-containing protein; histidine kinase A domain protein; Hpt domain protein.
 
  
 0.915
Galf_1046
KEGG: fagellar hook-basal body protein; TIGRFAM: fagellar hook-basal body protein; PFAM: flagellar basal body FlaE domain protein; protein of unknown function DUF1078 domain protein; flagellar basal body rod protein.
   
    0.906
Galf_2239
Multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold domain protein; histidine kinase A domain protein; GAF domain protein; Hpt domain protein; KEGG: sse:Ssed_2865 signal transduction histidine kinase-like protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; response regulator receiver; Hpt domain protein; GAF domain protein.
  
  
 0.887
Your Current Organism:
Gallionella capsiferriformans
NCBI taxonomy Id: 395494
Other names: G. capsiferriformans ES-2, Gallionella capsiferriformans ES-2, Gallionella capsiferriformans str. ES-2, Gallionella capsiferriformans strain ES-2, Gallionella ferruginea ES-2, Gallionella ferruginea subsp. capsiferriformans ES-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.