STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Galf_1065KEGG: slt:Slit_0594 flagellar export protein FliJ; TIGRFAM: flagellar export protein FliJ; PFAM: flagellar export FliJ family protein. (151 aa)    
Predicted Functional Partners:
Galf_1066
TIGRFAM: flagellar protein export ATPase FliI; ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; KEGG: slt:Slit_0595 flagellar protein export ATPase FliI; SMART: AAA ATPase.
  
 
 0.995
Galf_1067
PFAM: Flagellar assembly protein FliH/Type III secretion system HrpE; KEGG: slt:Slit_0596 flagellar assembly protein FliH/type III secretion system HrpE.
 
  
 0.995
Galf_1064
PFAM: Flagellar hook-length control protein-like, C-terminal domain; KEGG: slt:Slit_0593 flagellar hook-length control protein.
 
  
 0.994
Galf_1060
TIGRFAM: flagellar biosynthetic protein FliO; KEGG: slt:Slit_0589 flagellar biosynthetic protein FliO.
 
  
 0.989
Galf_1069
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.989
Galf_1068
KEGG: slt:Slit_0597 flagellar motor switch protein FliG; TIGRFAM: flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG.
  
  
 0.983
Galf_1063
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
  
 0.975
Galf_1062
KEGG: slt:Slit_0591 flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein.
 
  
 0.965
Galf_1061
KEGG: flagellar motor switch protein FliN; TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein.
  
  
 0.958
Galf_1037
PFAM: FlgN family protein; KEGG: slt:Slit_0562 FlgN family protein.
  
 
 0.946
Your Current Organism:
Gallionella capsiferriformans
NCBI taxonomy Id: 395494
Other names: G. capsiferriformans ES-2, Gallionella capsiferriformans ES-2, Gallionella capsiferriformans str. ES-2, Gallionella capsiferriformans strain ES-2, Gallionella ferruginea ES-2, Gallionella ferruginea subsp. capsiferriformans ES-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.