STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Galf_1521KEGG: mta:Moth_2243 hypothetical protein. (184 aa)    
Predicted Functional Partners:
Galf_1520
KEGG: hypothetical protein.
 
     0.952
Galf_1522
KEGG: hypothetical protein.
 
     0.949
Galf_1525
KEGG: hypothetical protein.
 
     0.884
Galf_1526
KEGG: sde:Sde_2753 hypothetical protein.
 
     0.884
Galf_1527
KEGG: putative ATP-dependent Lon protease.
 
     0.878
Galf_0896
KEGG: bvi:Bcep1808_2012 hypothetical protein.
 
     0.756
Galf_0884
KEGG: tmz:Tmz1t_0292 ATPase-like protein.
 
     0.650
Galf_0887
KEGG: aby:p3ABAYE0069 putative restriction enzyme.
 
     0.640
Galf_0883
PFAM: Domain of unknown function DUF1788; KEGG: eba:ebA5221 putative cytoplasmic protein.
  
     0.575
Galf_0895
PFAM: PglZ domain protein; KEGG: pol:Bpro_5031 hypothetical protein.
  
     0.568
Your Current Organism:
Gallionella capsiferriformans
NCBI taxonomy Id: 395494
Other names: G. capsiferriformans ES-2, Gallionella capsiferriformans ES-2, Gallionella capsiferriformans str. ES-2, Gallionella capsiferriformans strain ES-2, Gallionella ferruginea ES-2, Gallionella ferruginea subsp. capsiferriformans ES-2
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.