STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Galf_2026KEGG: eic:NT01EI_1990 hypothetical protein. (1640 aa)    
Predicted Functional Partners:
Galf_2029
KEGG: bav:BAV0420 phage protein.
       0.775
Galf_2027
KEGG: hypothetical protein.
       0.773
Galf_2028
KEGG: ctt:CtCNB1_2634 hypothetical protein.
       0.773
Galf_2030
Hypothetical protein; KEGG: lth:KLTH0E09922g KLTH0E09922p.
       0.636
Galf_2031
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.
       0.636
Galf_2032
KEGG: rpf:Rpic12D_3448 hypothetical protein.
       0.636
Galf_2033
Hypothetical protein.
       0.636
Galf_2034
KEGG: hypothetical protein.
       0.636
Galf_2035
KEGG: hypothetical protein.
       0.636
Galf_2036
KEGG: avn:Avin_17010 prophage CP4-57 regulatory, AlpA-like protein; manually curated; PFAM: Prophage CP4-57 regulatory.
       0.636
Your Current Organism:
Gallionella capsiferriformans
NCBI taxonomy Id: 395494
Other names: G. capsiferriformans ES-2, Gallionella capsiferriformans ES-2, Gallionella capsiferriformans str. ES-2, Gallionella capsiferriformans strain ES-2, Gallionella ferruginea ES-2, Gallionella ferruginea subsp. capsiferriformans ES-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.