STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lcho_0911PFAM: UspA domain protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: mpt:Mpe_A3032 putative serine/threonine kinase. (479 aa)    
Predicted Functional Partners:
Lcho_0910
PFAM: metallophosphoesterase; KEGG: mpt:Mpe_A3031 putative serine/threonine phosphatase.
 
   
 0.942
Lcho_0192
PFAM: Stage II sporulation E family protein; Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: mpt:Mpe_A0068 serine/threonine specific protein phosphatase (putative).
 
 0.807
Lcho_4063
SMART: protein phosphatase 2C domain protein; KEGG: azo:azo3885 putative phosphoprotein phosphatase.
 
 
 0.741
Lcho_2563
PFAM: Forkhead-associated protein; adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: mpt:Mpe_A2492 adenylate cyclase family 3-like protein.
 
 
 
 0.717
Lcho_0706
PFAM: Stage II sporulation E family protein; Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: mpt:Mpe_A2706 hypothetical protein.
 
 
 0.716
Lcho_2879
SMART: protein phosphatase 2C domain protein; KEGG: mpt:Mpe_A2007 hypothetical protein.
 
 
 0.703
Lcho_0191
FHA domain containing protein; PFAM: Forkhead-associated protein; KEGG: mpt:Mpe_A0067 hypothetical protein.
 
 
 
 0.646
Lcho_2804
Serine/threonine protein kinase; PFAM: Metal-dependent hydrolase HDOD; SMART: serine/threonine protein kinase; KEGG: mpt:Mpe_A2971 serine/threonine protein kinase-like protein.
 
    0.609
Lcho_2677
PFAM: Stage II sporulation E family protein; Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; serine/threonine protein kinase; KEGG: mpt:Mpe_A2316 putative serine/threonine protein kinase.
 
 
0.602
Lcho_4069
PAS/PAC sensor hybrid histidine kinase; KEGG: azo:azo2482 putative hybrid sensor and regulator; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
   
 
 0.600
Your Current Organism:
Leptothrix cholodnii
NCBI taxonomy Id: 395495
Other names: L. cholodnii SP-6, Leptothrix cholodnii SP-6, Leptothrix cholodnii str. SP-6, Leptothrix cholodnii strain SP-6
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