STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lcho_0998Chemotaxis phosphatase, CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P). (210 aa)    
Predicted Functional Partners:
Lcho_0999
PFAM: response regulator receiver; KEGG: aav:Aave_4410 response regulator receiver protein.
 
 0.999
Lcho_1000
PFAM: OmpA/MotB domain protein; KEGG: mpt:Mpe_A2873 chemotaxis signal transduction protein CheY.
 
  
 0.963
Lcho_1535
PFAM: response regulator receiver; KEGG: psp:PSPPH_0807 chemotaxis protein CheY.
 
 0.952
Lcho_1536
PFAM: response regulator receiver; KEGG: aha:AHA_1038 chemotaxis protein CheY.
  
 0.945
Lcho_1598
PFAM: response regulator receiver; KEGG: mpt:Mpe_A0584 chemotaxis signal transduction protein CheY.
 
 
 0.927
Lcho_3796
PFAM: response regulator receiver; KEGG: rfr:Rfer_0899 response regulator receiver domain protein.
 
 
 0.923
Lcho_1001
KEGG: mpt:Mpe_A2872 chemotaxis signal transduction protein CheY.
 
  
 0.905
Lcho_3967
CheA signal transduction histidine kinase; PFAM: response regulator receiver; CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: aav:Aave_0905 CheA signal transduction histidine kinase.
  
 
 0.894
Lcho_2726
KEGG: mpt:Mpe_A3065 flagellum-specific muramidase; TIGRFAM: flagellar rod assembly protein/muramidase FlgJ; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; SMART: Lysozyme subfamily 2.
 
  
 0.885
Lcho_0332
CheA signal transduction histidine kinase; PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: asa:ASA_3266 chemotaxis protein CheA.
  
 
 0.869
Your Current Organism:
Leptothrix cholodnii
NCBI taxonomy Id: 395495
Other names: L. cholodnii SP-6, Leptothrix cholodnii SP-6, Leptothrix cholodnii str. SP-6, Leptothrix cholodnii strain SP-6
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