STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lcho_1192Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone. (561 aa)    
Predicted Functional Partners:
Lcho_1194
PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: dac:Daci_2390 electron transfer flavoprotein alpha/beta-subunit.
 
 0.983
Lcho_1195
PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: mpt:Mpe_A1297 electron transfer flavoprotein alpha-subunit.
 
 0.977
Lcho_0857
PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: ajs:Ajs_2810 electron transfer flavoprotein beta-subunit.
 
 0.965
Lcho_2540
PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: dac:Daci_2390 electron transfer flavoprotein alpha/beta-subunit.
 
 0.965
Lcho_3598
PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: dac:Daci_2390 electron transfer flavoprotein alpha/beta-subunit.
 
 0.965
Lcho_0858
PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: ajs:Ajs_2809 electron transfer flavoprotein, alpha subunit.
 
 0.955
Lcho_0162
PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: azo:azo3005 probable electron transfer flavoprotein, beta subunit.
 
 0.953
Lcho_2539
PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: mpt:Mpe_A1297 electron transfer flavoprotein alpha-subunit.
 
 0.951
Lcho_3599
PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: mpt:Mpe_A1297 electron transfer flavoprotein alpha-subunit.
 
 0.950
Lcho_0163
PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: azo:azo3006 probable electron transfer flavoprotein, alpha subunit.
 
 0.925
Your Current Organism:
Leptothrix cholodnii
NCBI taxonomy Id: 395495
Other names: L. cholodnii SP-6, Leptothrix cholodnii SP-6, Leptothrix cholodnii str. SP-6, Leptothrix cholodnii strain SP-6
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.