STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lcho_1817PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; KEGG: mpt:Mpe_A2581 tungsten-containing aldehyde:ferredoxin oxidoreductase. (615 aa)    
Predicted Functional Partners:
Lcho_1816
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pna:Pnap_0048 4Fe-4S ferredoxin, iron-sulfur binding domain protein.
 
 
 0.981
Lcho_1132
Hydroxypyruvate reductase; PFAM: MOFRL domain protein; KEGG: azo:azo1162 probable hydroxypyruvate reductase.
     
  0.900
Lcho_3177
Hydroxypyruvate reductase; PFAM: MOFRL domain protein; KEGG: azo:azo1162 probable hydroxypyruvate reductase.
     
  0.900
Lcho_1818
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pna:Pnap_0050 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
 
     0.889
Lcho_1819
PFAM: thiamineS protein; KEGG: mpt:Mpe_A2579 hypothetical protein.
 
     0.884
Lcho_1815
KEGG: mpt:Mpe_A2221 hypothetical protein.
 
   
 0.857
Lcho_1813
KEGG: mpt:Mpe_A2223 putative permease component of ABC transporter.
 
   
 0.810
Lcho_3732
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mpt:Mpe_A1166 putative iron-sulfur binding protein.
 
 
 0.802
Lcho_3727
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mpt:Mpe_A1171 formate dehydrogenase iron-sulfur subunit.
 
 
 0.771
Lcho_1822
Transcriptional regulator of molybdate metabolism, LysR family; PFAM: regulatory protein LysR; KEGG: bbr:BB2126 hypothetical protein.
 
   
 0.730
Your Current Organism:
Leptothrix cholodnii
NCBI taxonomy Id: 395495
Other names: L. cholodnii SP-6, Leptothrix cholodnii SP-6, Leptothrix cholodnii str. SP-6, Leptothrix cholodnii strain SP-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.