STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lcho_2118Propionyl-CoA carboxylase; PFAM: carboxyl transferase; KEGG: mpt:Mpe_A3359 propionyl-CoA carboxylase. (540 aa)    
Predicted Functional Partners:
Lcho_2116
Carbamoyl-phosphate synthase L chain ATP-binding; PFAM: biotin/lipoyl attachment domain-containing protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: mpt:Mpe_A3356 putative acyl-CoA carboxylase alpha chain protein.
 0.997
Lcho_2119
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: mpt:Mpe_A3360 acyl-CoA dehydrogenase, probably isovaleryl-CoA dehydrogenase.
 
 
 0.994
Lcho_2117
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rso:RSc0267 enoyl-CoA hydratase.
 
 0.989
Lcho_1196
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pna:Pnap_2941 enoyl-CoA hydratase/isomerase.
 
 0.944
Lcho_2115
PFAM: pyruvate carboxyltransferase; KEGG: mpt:Mpe_A3354 hydroxymethylglutaryl-CoA lyase.
 
 
 0.932
Lcho_1213
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: pna:Pnap_2701 acyl-CoA dehydrogenase domain protein.
  
 
 0.923
Lcho_2693
PFAM: biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: ajs:Ajs_2043 carbamoyl-phosphate synthase L chain, ATP-binding.
 
 0.896
Lcho_0445
PFAM: pyruvate carboxyltransferase; KEGG: pol:Bpro_4514 pyruvate carboxyltransferase.
 
 
 0.678
Lcho_3065
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
  
  
 0.671
Lcho_0438
PFAM: pyruvate carboxyltransferase; KEGG: pna:Pnap_1123 pyruvate carboxyltransferase; Belongs to the alpha-IPM synthase/homocitrate synthase family.
 
 
 0.644
Your Current Organism:
Leptothrix cholodnii
NCBI taxonomy Id: 395495
Other names: L. cholodnii SP-6, Leptothrix cholodnii SP-6, Leptothrix cholodnii str. SP-6, Leptothrix cholodnii strain SP-6
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