Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Lcho_2232 | Lcho_2233 | Phage-related protein tail component-like protein; KEGG: bwe:BcerKBAB4_5440 hypothetical protein. | KEGG: aba:Acid345_3158 hypothetical protein. | 0.975 |
Lcho_2232 | Lcho_2234 | Phage-related protein tail component-like protein; KEGG: bwe:BcerKBAB4_5440 hypothetical protein. | KEGG: pst:PSPTO_4044 hypothetical protein. | 0.896 |
Lcho_2232 | Lcho_2235 | Phage-related protein tail component-like protein; KEGG: bwe:BcerKBAB4_5440 hypothetical protein. | PFAM: Prophage tail length tape measure; KEGG: rso:RSc1690 probable phage HK97 tail length TAPE measure-related protein. | 0.911 |
Lcho_2232 | Lcho_2236 | Phage-related protein tail component-like protein; KEGG: bwe:BcerKBAB4_5440 hypothetical protein. | PFAM: Protein of unknown function DUF1799 phage-related; KEGG: aav:Aave_1781 hypothetical protein. | 0.767 |
Lcho_2232 | Lcho_2237 | Phage-related protein tail component-like protein; KEGG: bwe:BcerKBAB4_5440 hypothetical protein. | Hypothetical protein. | 0.702 |
Lcho_2232 | Lcho_2238 | Phage-related protein tail component-like protein; KEGG: bwe:BcerKBAB4_5440 hypothetical protein. | KEGG: rsq:Rsph17025_2092 hypothetical protein. | 0.770 |
Lcho_2232 | Lcho_2239 | Phage-related protein tail component-like protein; KEGG: bwe:BcerKBAB4_5440 hypothetical protein. | Hypothetical protein. | 0.590 |
Lcho_2232 | Lcho_2240 | Phage-related protein tail component-like protein; KEGG: bwe:BcerKBAB4_5440 hypothetical protein. | Hypothetical protein. | 0.514 |
Lcho_2232 | Lcho_2241 | Phage-related protein tail component-like protein; KEGG: bwe:BcerKBAB4_5440 hypothetical protein. | PFAM: protein of unknown function DUF1320; KEGG: pol:Bpro_3744 protein of unknown function DUF1320. | 0.581 |
Lcho_2232 | Lcho_2242 | Phage-related protein tail component-like protein; KEGG: bwe:BcerKBAB4_5440 hypothetical protein. | Hypothetical protein. | 0.514 |
Lcho_2233 | Lcho_2232 | KEGG: aba:Acid345_3158 hypothetical protein. | Phage-related protein tail component-like protein; KEGG: bwe:BcerKBAB4_5440 hypothetical protein. | 0.975 |
Lcho_2233 | Lcho_2234 | KEGG: aba:Acid345_3158 hypothetical protein. | KEGG: pst:PSPTO_4044 hypothetical protein. | 0.798 |
Lcho_2233 | Lcho_2235 | KEGG: aba:Acid345_3158 hypothetical protein. | PFAM: Prophage tail length tape measure; KEGG: rso:RSc1690 probable phage HK97 tail length TAPE measure-related protein. | 0.773 |
Lcho_2233 | Lcho_2236 | KEGG: aba:Acid345_3158 hypothetical protein. | PFAM: Protein of unknown function DUF1799 phage-related; KEGG: aav:Aave_1781 hypothetical protein. | 0.757 |
Lcho_2233 | Lcho_2237 | KEGG: aba:Acid345_3158 hypothetical protein. | Hypothetical protein. | 0.702 |
Lcho_2233 | Lcho_2238 | KEGG: aba:Acid345_3158 hypothetical protein. | KEGG: rsq:Rsph17025_2092 hypothetical protein. | 0.715 |
Lcho_2233 | Lcho_2239 | KEGG: aba:Acid345_3158 hypothetical protein. | Hypothetical protein. | 0.590 |
Lcho_2233 | Lcho_2240 | KEGG: aba:Acid345_3158 hypothetical protein. | Hypothetical protein. | 0.514 |
Lcho_2233 | Lcho_2241 | KEGG: aba:Acid345_3158 hypothetical protein. | PFAM: protein of unknown function DUF1320; KEGG: pol:Bpro_3744 protein of unknown function DUF1320. | 0.543 |
Lcho_2233 | Lcho_2242 | KEGG: aba:Acid345_3158 hypothetical protein. | Hypothetical protein. | 0.514 |
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