Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Lcho_2241 | Lcho_2243 | PFAM: protein of unknown function DUF1320; KEGG: pol:Bpro_3744 protein of unknown function DUF1320. | KEGG: mag:amb1768 Mu-like prophage major head subunit gpT. | 0.905 |
Lcho_2241 | Lcho_2245 | PFAM: protein of unknown function DUF1320; KEGG: pol:Bpro_3744 protein of unknown function DUF1320. | KEGG: bvi:Bcep1808_1303 hypothetical protein. | 0.874 |
Lcho_2241 | Lcho_2247 | PFAM: protein of unknown function DUF1320; KEGG: pol:Bpro_3744 protein of unknown function DUF1320. | PFAM: putative head morphogenesis protein SPP1 gp7; KEGG: pol:Bpro_3784 phage putative head morphogenesis protein, SPP1 gp7. | 0.854 |
Lcho_2241 | Lcho_2248 | PFAM: protein of unknown function DUF1320; KEGG: pol:Bpro_3744 protein of unknown function DUF1320. | PFAM: protein of unknown function DUF935; KEGG: bvi:Bcep1808_1306 protein of unknown function DUF935. | 0.858 |
Lcho_2241 | Lcho_2249 | PFAM: protein of unknown function DUF1320; KEGG: pol:Bpro_3744 protein of unknown function DUF1320. | KEGG: pol:Bpro_3782 hypothetical protein. | 0.837 |
Lcho_2241 | Lcho_2273 | PFAM: protein of unknown function DUF1320; KEGG: pol:Bpro_3744 protein of unknown function DUF1320. | KEGG: bbr:BB3647 hypothetical protein. | 0.487 |
Lcho_2241 | Lcho_2277 | PFAM: protein of unknown function DUF1320; KEGG: pol:Bpro_3744 protein of unknown function DUF1320. | KEGG: mfa:Mfla_2720 hypothetical protein. | 0.625 |
Lcho_2241 | Lcho_2282 | PFAM: protein of unknown function DUF1320; KEGG: pol:Bpro_3744 protein of unknown function DUF1320. | KEGG: mfa:Mfla_2721 hypothetical protein. | 0.775 |
Lcho_2241 | Lcho_2284 | PFAM: protein of unknown function DUF1320; KEGG: pol:Bpro_3744 protein of unknown function DUF1320. | KEGG: eca:ECA3696 putative phage regluatory protein. | 0.794 |
Lcho_2243 | Lcho_2241 | KEGG: mag:amb1768 Mu-like prophage major head subunit gpT. | PFAM: protein of unknown function DUF1320; KEGG: pol:Bpro_3744 protein of unknown function DUF1320. | 0.905 |
Lcho_2243 | Lcho_2245 | KEGG: mag:amb1768 Mu-like prophage major head subunit gpT. | KEGG: bvi:Bcep1808_1303 hypothetical protein. | 0.919 |
Lcho_2243 | Lcho_2247 | KEGG: mag:amb1768 Mu-like prophage major head subunit gpT. | PFAM: putative head morphogenesis protein SPP1 gp7; KEGG: pol:Bpro_3784 phage putative head morphogenesis protein, SPP1 gp7. | 0.877 |
Lcho_2243 | Lcho_2248 | KEGG: mag:amb1768 Mu-like prophage major head subunit gpT. | PFAM: protein of unknown function DUF935; KEGG: bvi:Bcep1808_1306 protein of unknown function DUF935. | 0.913 |
Lcho_2243 | Lcho_2249 | KEGG: mag:amb1768 Mu-like prophage major head subunit gpT. | KEGG: pol:Bpro_3782 hypothetical protein. | 0.850 |
Lcho_2243 | Lcho_2273 | KEGG: mag:amb1768 Mu-like prophage major head subunit gpT. | KEGG: bbr:BB3647 hypothetical protein. | 0.677 |
Lcho_2243 | Lcho_2277 | KEGG: mag:amb1768 Mu-like prophage major head subunit gpT. | KEGG: mfa:Mfla_2720 hypothetical protein. | 0.498 |
Lcho_2243 | Lcho_2282 | KEGG: mag:amb1768 Mu-like prophage major head subunit gpT. | KEGG: mfa:Mfla_2721 hypothetical protein. | 0.783 |
Lcho_2243 | Lcho_2284 | KEGG: mag:amb1768 Mu-like prophage major head subunit gpT. | KEGG: eca:ECA3696 putative phage regluatory protein. | 0.787 |
Lcho_2245 | Lcho_2241 | KEGG: bvi:Bcep1808_1303 hypothetical protein. | PFAM: protein of unknown function DUF1320; KEGG: pol:Bpro_3744 protein of unknown function DUF1320. | 0.874 |
Lcho_2245 | Lcho_2243 | KEGG: bvi:Bcep1808_1303 hypothetical protein. | KEGG: mag:amb1768 Mu-like prophage major head subunit gpT. | 0.919 |
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