Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Lcho_2494 | Lcho_2495 | Hypothetical protein. | Hypothetical protein. | 0.565 |
Lcho_2494 | Lcho_2496 | Hypothetical protein. | KEGG: psa:PST_0859 ribose-phosphate pyrophosphokinase family protein; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; Belongs to the ribose-phosphate pyrophosphokinase family. | 0.416 |
Lcho_2494 | Lcho_2497 | Hypothetical protein. | TIGRFAM: thymidine phosphorylase; PFAM: glycosyl transferase family 3; Pyrimidine nucleoside phosphorylase domain; KEGG: rfr:Rfer_2241 thymidine phosphorylase. | 0.416 |
Lcho_2495 | Lcho_2494 | Hypothetical protein. | Hypothetical protein. | 0.565 |
Lcho_2495 | Lcho_2496 | Hypothetical protein. | KEGG: psa:PST_0859 ribose-phosphate pyrophosphokinase family protein; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; Belongs to the ribose-phosphate pyrophosphokinase family. | 0.553 |
Lcho_2495 | Lcho_2497 | Hypothetical protein. | TIGRFAM: thymidine phosphorylase; PFAM: glycosyl transferase family 3; Pyrimidine nucleoside phosphorylase domain; KEGG: rfr:Rfer_2241 thymidine phosphorylase. | 0.553 |
Lcho_2496 | Lcho_2494 | KEGG: psa:PST_0859 ribose-phosphate pyrophosphokinase family protein; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; Belongs to the ribose-phosphate pyrophosphokinase family. | Hypothetical protein. | 0.416 |
Lcho_2496 | Lcho_2495 | KEGG: psa:PST_0859 ribose-phosphate pyrophosphokinase family protein; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; Belongs to the ribose-phosphate pyrophosphokinase family. | Hypothetical protein. | 0.553 |
Lcho_2496 | Lcho_2497 | KEGG: psa:PST_0859 ribose-phosphate pyrophosphokinase family protein; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; Belongs to the ribose-phosphate pyrophosphokinase family. | TIGRFAM: thymidine phosphorylase; PFAM: glycosyl transferase family 3; Pyrimidine nucleoside phosphorylase domain; KEGG: rfr:Rfer_2241 thymidine phosphorylase. | 0.955 |
Lcho_2497 | Lcho_2494 | TIGRFAM: thymidine phosphorylase; PFAM: glycosyl transferase family 3; Pyrimidine nucleoside phosphorylase domain; KEGG: rfr:Rfer_2241 thymidine phosphorylase. | Hypothetical protein. | 0.416 |
Lcho_2497 | Lcho_2495 | TIGRFAM: thymidine phosphorylase; PFAM: glycosyl transferase family 3; Pyrimidine nucleoside phosphorylase domain; KEGG: rfr:Rfer_2241 thymidine phosphorylase. | Hypothetical protein. | 0.553 |
Lcho_2497 | Lcho_2496 | TIGRFAM: thymidine phosphorylase; PFAM: glycosyl transferase family 3; Pyrimidine nucleoside phosphorylase domain; KEGG: rfr:Rfer_2241 thymidine phosphorylase. | KEGG: psa:PST_0859 ribose-phosphate pyrophosphokinase family protein; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; Belongs to the ribose-phosphate pyrophosphokinase family. | 0.955 |