STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lcho_2673KEGG: mpt:Mpe_A2097 putative ferredoxin. (454 aa)    
Predicted Functional Partners:
Lcho_2672
KEGG: pol:Bpro_3714 hypothetical protein.
     0.980
Lcho_3221
PFAM: FAD dependent oxidoreductase; KEGG: mpt:Mpe_A3664 glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 
 0.934
Lcho_2674
PFAM: Rubrerythrin; KEGG: mpt:Mpe_A2098 putative oxidative stress related rubrerythrin protein.
 
  
 0.909
gpsA
PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: mpt:Mpe_A0717 glycerol-3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
    
  0.901
plsY
Protein of unknown function DUF205; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.
     
  0.900
Lcho_0213
PFAM: phospholipid/glycerol acyltransferase; KEGG: mpt:Mpe_A3378 putative acyltransferase.
     
  0.800
Lcho_0411
KEGG: pol:Bpro_1459 dihydroxyacetone kinase, subunit L; TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak kinase; Dak phosphatase.
     
  0.800
Lcho_0893
PFAM: Dak kinase; Dak phosphatase; KEGG: ret:RHE_CH02988 dihydroxyacetone kinase protein.
     
  0.800
Lcho_2898
Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid.
     
  0.800
Lcho_3957
PFAM: phospholipid/glycerol acyltransferase; KEGG: mpt:Mpe_A0710 putative 1-acylglycerol-3-phosphate O-acyltransferase.
     
  0.800
Your Current Organism:
Leptothrix cholodnii
NCBI taxonomy Id: 395495
Other names: L. cholodnii SP-6, Leptothrix cholodnii SP-6, Leptothrix cholodnii str. SP-6, Leptothrix cholodnii strain SP-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.