STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lcho_2802PFAM: Ethanolamine ammonia-lyase light chain; KEGG: pna:Pnap_2627 ethanolamine ammonia-lyase; Belongs to the EutC family. (286 aa)    
Predicted Functional Partners:
Lcho_2801
PFAM: Ethanolamine ammonia lyase large subunit; KEGG: mpt:Mpe_A2417 putative ethanolamine ammonia-lyase heavy chain protein.
 
 0.999
Lcho_0749
PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: ajs:Ajs_0858 glycerophosphodiester phosphodiesterase.
     
  0.900
Lcho_3369
PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: aav:Aave_1298 glycerophosphoryl diester phosphodiesterase.
     
  0.900
Lcho_1846
PFAM: GCN5-related N-acetyltransferase; KEGG: dar:Daro_3437 GCN5-related N-acetyltransferase.
 
      0.612
Lcho_2800
PFAM: nuclease (SNase domain protein); KEGG: nmu:Nmul_A2003 nuclease (SNase-like).
       0.523
Lcho_3341
Acetaldehyde dehydrogenase (acetylating); Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds.
     
  0.499
Your Current Organism:
Leptothrix cholodnii
NCBI taxonomy Id: 395495
Other names: L. cholodnii SP-6, Leptothrix cholodnii SP-6, Leptothrix cholodnii str. SP-6, Leptothrix cholodnii strain SP-6
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