STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lcho_2853KEGG: mpt:Mpe_A3449 hypothetical protein. (153 aa)    
Predicted Functional Partners:
nnrE
Carbohydrate kinase, YjeF related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow t [...]
       0.780
Lcho_2851
PFAM: Amidase; KEGG: mpt:Mpe_A1980 amidase.
       0.773
Lcho_2852
D-amino-acid dehydrogenase; PFAM: FAD dependent oxidoreductase; KEGG: mpt:Mpe_A1981 D-amino-acid dehydrogenase.
       0.773
Lcho_3914
KEGG: mpt:Mpe_A0205 hypothetical protein.
  
     0.754
Lcho_1059
KEGG: mpt:Mpe_A1145 hypothetical protein.
  
     0.734
Lcho_2710
KEGG: mpt:Mpe_A1366 putative signal peptide protein.
  
     0.730
Lcho_3266
KEGG: mpt:Mpe_A3630 hypothetical protein.
  
     0.714
Lcho_0105
KEGG: ajs:Ajs_0499 hypothetical protein.
  
     0.711
Lcho_2926
PFAM: Lytic transglycosylase catalytic; KEGG: mpt:Mpe_A2937 hypothetical protein.
  
     0.709
Lcho_2895
KEGG: ajs:Ajs_1767 putative transmembrane protein.
  
     0.702
Your Current Organism:
Leptothrix cholodnii
NCBI taxonomy Id: 395495
Other names: L. cholodnii SP-6, Leptothrix cholodnii SP-6, Leptothrix cholodnii str. SP-6, Leptothrix cholodnii strain SP-6
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