STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lcho_2898Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid. (126 aa)    
Predicted Functional Partners:
Lcho_2845
PFAM: phosphatidate cytidylyltransferase; KEGG: mpt:Mpe_A1974 putative phosphatidate cytidylyltransferase membrane protein; Belongs to the CDS family.
    
 0.921
Lcho_3603
KEGG: eba:ebA5591 hypothetical protein.
  
 
  0.908
Lcho_3957
PFAM: phospholipid/glycerol acyltransferase; KEGG: mpt:Mpe_A0710 putative 1-acylglycerol-3-phosphate O-acyltransferase.
    
 0.908
Lcho_0213
PFAM: phospholipid/glycerol acyltransferase; KEGG: mpt:Mpe_A3378 putative acyltransferase.
    
 0.906
gpsA
PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: mpt:Mpe_A0717 glycerol-3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
     
 0.837
ybeY
Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
  
 0.816
Lcho_3221
PFAM: FAD dependent oxidoreductase; KEGG: mpt:Mpe_A3664 glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
    
  0.804
Lcho_2673
KEGG: mpt:Mpe_A2097 putative ferredoxin.
     
  0.800
Lcho_2896
KEGG: mpt:Mpe_A2108 hypothetical protein.
       0.673
Lcho_2897
PFAM: RDD domain containing protein; KEGG: mpt:Mpe_A2109 hypothetical protein.
       0.672
Your Current Organism:
Leptothrix cholodnii
NCBI taxonomy Id: 395495
Other names: L. cholodnii SP-6, Leptothrix cholodnii SP-6, Leptothrix cholodnii str. SP-6, Leptothrix cholodnii strain SP-6
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