Lcho_3484 protein (Leptothrix cholodnii) - STRING interaction network

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

Lcho_3484

PFAM: porin Gram-negative type; KEGG: slo:Shew_3260 porin, gram-negative type. (357 aa)

Predicted Functional Partners:

Lcho_1258

0.709

Lcho_2566

0.707

Lcho_2423

0.597

Lcho_3413

0.596

Lcho_0713

0.540

Lcho_1982

0.540

Lcho_3412

0.540

Lcho_3391

0.533

Lcho_3483

0.491

Lcho_3485

0.418

Your Current Organism:

Leptothrix cholodnii

NCBI taxonomy Id: 395495
Other names: L. cholodnii SP-6, Leptothrix cholodnii SP-6, Leptothrix cholodnii str. SP-6, Leptothrix cholodnii strain SP-6

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
Lcho_0713	Lcho_1258	KEGG: dac:Daci_5627 porin, gram-negative type.	KEGG: rfr:Rfer_0528 porin, gram-negative type.	0.665
Lcho_0713	Lcho_1982	KEGG: dac:Daci_5627 porin, gram-negative type.	KEGG: dar:Daro_1045 hypothetical protein.	0.594
Lcho_0713	Lcho_2423	KEGG: dac:Daci_5627 porin, gram-negative type.	KEGG: dac:Daci_5627 porin, gram-negative type.	0.548
Lcho_0713	Lcho_2566	KEGG: dac:Daci_5627 porin, gram-negative type.	PFAM: porin Gram-negative type; KEGG: ajs:Ajs_0134 porin, gram-negative type.	0.663
Lcho_0713	Lcho_3391	KEGG: dac:Daci_5627 porin, gram-negative type.	PFAM: VacJ family lipoprotein; KEGG: mpt:Mpe_A3098 putative lipoprotein.	0.533
Lcho_0713	Lcho_3412	KEGG: dac:Daci_5627 porin, gram-negative type.	KEGG: pol:Bpro_0746 outer membrane protein (porin)-like.	0.653
Lcho_0713	Lcho_3413	KEGG: dac:Daci_5627 porin, gram-negative type.	KEGG: mms:mma_0290 outer membrane porin.	0.672
Lcho_0713	Lcho_3484	KEGG: dac:Daci_5627 porin, gram-negative type.	PFAM: porin Gram-negative type; KEGG: slo:Shew_3260 porin, gram-negative type.	0.540
Lcho_1258	Lcho_0713	KEGG: rfr:Rfer_0528 porin, gram-negative type.	KEGG: dac:Daci_5627 porin, gram-negative type.	0.665
Lcho_1258	Lcho_1982	KEGG: rfr:Rfer_0528 porin, gram-negative type.	KEGG: dar:Daro_1045 hypothetical protein.	0.540
Lcho_1258	Lcho_2423	KEGG: rfr:Rfer_0528 porin, gram-negative type.	KEGG: dac:Daci_5627 porin, gram-negative type.	0.667
Lcho_1258	Lcho_2566	KEGG: rfr:Rfer_0528 porin, gram-negative type.	PFAM: porin Gram-negative type; KEGG: ajs:Ajs_0134 porin, gram-negative type.	0.662
Lcho_1258	Lcho_3391	KEGG: rfr:Rfer_0528 porin, gram-negative type.	PFAM: VacJ family lipoprotein; KEGG: mpt:Mpe_A3098 putative lipoprotein.	0.442
Lcho_1258	Lcho_3412	KEGG: rfr:Rfer_0528 porin, gram-negative type.	KEGG: pol:Bpro_0746 outer membrane protein (porin)-like.	0.789
Lcho_1258	Lcho_3413	KEGG: rfr:Rfer_0528 porin, gram-negative type.	KEGG: mms:mma_0290 outer membrane porin.	0.671
Lcho_1258	Lcho_3484	KEGG: rfr:Rfer_0528 porin, gram-negative type.	PFAM: porin Gram-negative type; KEGG: slo:Shew_3260 porin, gram-negative type.	0.709
Lcho_1982	Lcho_0713	KEGG: dar:Daro_1045 hypothetical protein.	KEGG: dac:Daci_5627 porin, gram-negative type.	0.594
Lcho_1982	Lcho_1258	KEGG: dar:Daro_1045 hypothetical protein.	KEGG: rfr:Rfer_0528 porin, gram-negative type.	0.540
Lcho_1982	Lcho_2423	KEGG: dar:Daro_1045 hypothetical protein.	KEGG: dac:Daci_5627 porin, gram-negative type.	0.595
Lcho_1982	Lcho_2566	KEGG: dar:Daro_1045 hypothetical protein.	PFAM: porin Gram-negative type; KEGG: ajs:Ajs_0134 porin, gram-negative type.	0.540