STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lcho_3579KEGG: mpt:Mpe_A2078 hypothetical protein. (298 aa)    
Predicted Functional Partners:
Lcho_3580
PFAM: molybdopterin binding domain; KEGG: mpt:Mpe_A2077 hypothetical protein.
       0.791
Lcho_2513
ZipA FtsZ-binding region; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family.
 
     0.768
Lcho_3914
KEGG: mpt:Mpe_A0205 hypothetical protein.
  
     0.753
Lcho_0679
KEGG: mpt:Mpe_A1102 hypothetical protein.
  
     0.742
Lcho_3582
KEGG: mpt:Mpe_A2075 conserved hypothetical signal peptide protein.
 
     0.739
Lcho_2702
PFAM: protein of unknown function DUF339; KEGG: mpt:Mpe_A2166 hypothetical protein.
  
     0.729
Lcho_3533
KEGG: mpt:Mpe_A0190 putative ATP synthase protein I AtpI.
  
     0.720
Lcho_2895
KEGG: ajs:Ajs_1767 putative transmembrane protein.
  
     0.711
Lcho_3426
KEGG: mpt:Mpe_A3135 general secretion pathway protein N.
  
     0.706
Lcho_1059
KEGG: mpt:Mpe_A1145 hypothetical protein.
  
     0.701
Your Current Organism:
Leptothrix cholodnii
NCBI taxonomy Id: 395495
Other names: L. cholodnii SP-6, Leptothrix cholodnii SP-6, Leptothrix cholodnii str. SP-6, Leptothrix cholodnii strain SP-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.