STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lcho_3679PFAM: CBS domain containing protein; KEGG: pna:Pnap_1141 putative signal-transduction protein with CBS domains. (150 aa)    
Predicted Functional Partners:
Lcho_3678
PFAM: ABC transporter related; SbmABacA family protein; ABC transporter domain protein; SMART: AAA ATPase; KEGG: pna:Pnap_1803 ABC transporter domain protein.
       0.588
Lcho_1523
Putative signal-transduction protein with CBS domains; PFAM: CBS domain containing protein; KEGG: mpt:Mpe_A1423 hypothetical protein.
 
     0.571
Lcho_2834
Protein of unknown function DUF299; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation/dephosphorylation.
  
  
 0.554
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
     
 0.539
Lcho_3680
PFAM: Phosphoglycerate mutase; KEGG: aha:AHA_2360 phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family.
  
  
 0.525
Your Current Organism:
Leptothrix cholodnii
NCBI taxonomy Id: 395495
Other names: L. cholodnii SP-6, Leptothrix cholodnii SP-6, Leptothrix cholodnii str. SP-6, Leptothrix cholodnii strain SP-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.