STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lcho_3784PFAM: oxidoreductase molybdopterin binding; Mo-co oxidoreductase dimerisation domain; KEGG: mpt:Mpe_A2438 putative sulfite oxidase molybdopterin subunit. (457 aa)    
Predicted Functional Partners:
Lcho_3783
PFAM: cytochrome c class I; KEGG: mpt:Mpe_A2437 diheme cytochrome c SoxD.
 
 
 
 0.971
Lcho_3367
PFAM: Rhodanese domain protein; KEGG: mpt:Mpe_A2636 3-mercaptopyruvate sulfurtransferase.
    
 0.921
Lcho_3780
KEGG: mpt:Mpe_A2434 hypothetical protein.
 
 
 
 0.912
Lcho_3782
KEGG: mpt:Mpe_A2436 hypothetical protein.
 
   
 0.909
Lcho_3781
PFAM: Sulphur oxidation protein SoxZ; KEGG: mpt:Mpe_A2435 hypothetical protein.
 
   
 0.900
Lcho_3779
KEGG: pol:Bpro_2626 hypothetical protein.
 
 
 
 0.882
Lcho_3778
PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: mpt:Mpe_A2432 putative sulfur oxidation signal peptide protein; Belongs to the 5'-nucleotidase family.
 
   
 0.844
Lcho_0063
KEGG: bja:bll2732 putative cytochrome c.
 
 
 
 0.814
msrQ
Ferric reductase domain protein transmembrane component domain; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the r [...]
  
  
 0.778
Lcho_3776
PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: dar:Daro_4041 YeeE/YedE.
 
   
 0.778
Your Current Organism:
Leptothrix cholodnii
NCBI taxonomy Id: 395495
Other names: L. cholodnii SP-6, Leptothrix cholodnii SP-6, Leptothrix cholodnii str. SP-6, Leptothrix cholodnii strain SP-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.