STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lcho_3804TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: mpt:Mpe_A0122 thiosulfate binding protein. (337 aa)    
Predicted Functional Partners:
Lcho_3805
Sulfate ABC transporter, inner membrane subunit CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
 
 0.999
Lcho_3806
TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysW; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mpt:Mpe_A0125 ABC type transporter.
 
 
 0.999
cysA
Sulfate ABC transporter, ATPase subunit; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.
 
 
 0.999
Lcho_2787
PFAM: phosphoadenosine phosphosulfate reductase; KEGG: mpt:Mpe_A1500 sulfate adenylyltransferase.
 
 
 0.992
Lcho_2788
Sulfate adenylyltransferase, large subunit; KEGG: mpt:Mpe_A1499 sulfate adenylyltransferase; TIGRFAM: sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor GTP-binding.
  
 
 0.990
Lcho_2786
Adenylylsulfate reductase, thioredoxin dependent; Reduction of activated sulfate into sulfite.
  
  
 0.763
Lcho_2784
PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: mpt:Mpe_A1503 putative nitrite/sulfite reductase.
  
  
 0.694
Lcho_0065
KEGG: bbt:BBta_2763 sulfur oxidation protein SoxY.
     
 0.666
Lcho_3782
KEGG: mpt:Mpe_A2436 hypothetical protein.
     
 0.666
Lcho_1825
KEGG: mpt:Mpe_A0471 hypothetical protein.
     
 0.655
Your Current Organism:
Leptothrix cholodnii
NCBI taxonomy Id: 395495
Other names: L. cholodnii SP-6, Leptothrix cholodnii SP-6, Leptothrix cholodnii str. SP-6, Leptothrix cholodnii strain SP-6
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