STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lcho_3951Histidine kinase; PFAM: ATP-binding region ATPase domain protein; KEGG: mpt:Mpe_A3238 signal transduction histidine kinase-like protein. (625 aa)    
Predicted Functional Partners:
Lcho_3952
Two component transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; response regulator receiver; Bacterio-opsin activator HTH domain protein; KEGG: mpt:Mpe_A3237 response regulator.
 
 
 0.920
Lcho_1634
Two component transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mpt:Mpe_A3237 response regulator.
 
 
 0.846
Lcho_1923
Two component transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mpt:Mpe_A1249 response regulator.
 
 
 0.846
Lcho_4097
PFAM: regulatory protein LuxR; response regulator receiver; KEGG: rfr:Rfer_2039 two component transcriptional regulator, LuxR family.
 
 
 0.843
Lcho_1782
Two component transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mpt:Mpe_A1026 response regulator protein.
 
 
 0.841
Lcho_3850
PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mpt:Mpe_A2603 two-component response regulator.
 
 
 0.841
Lcho_1595
Two component transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mpt:Mpe_A0581 response regulator protein.
 
 
 0.840
Lcho_1574
PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mes:Meso_0341 two component transcriptional regulator, LuxR family.
 
 
 0.838
Lcho_1400
Two component transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; response regulator receiver; KEGG: sat:SYN_01953 response regulator with a HTH DNA-binding domain.
 
 
 0.835
Lcho_0242
Two component transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; response regulator receiver; Bacterio-opsin activator HTH domain protein; KEGG: mpt:Mpe_A3043 DNA binding response regulator, LuxR family.
 
 
 0.833
Your Current Organism:
Leptothrix cholodnii
NCBI taxonomy Id: 395495
Other names: L. cholodnii SP-6, Leptothrix cholodnii SP-6, Leptothrix cholodnii str. SP-6, Leptothrix cholodnii strain SP-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.