node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lcho_0002 | Lcho_4170 | Lcho_0002 | Lcho_4170 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | KEGG: tbd:Tbd_0934 hypothetical protein. | 0.549 |
Lcho_0002 | Lcho_4171 | Lcho_0002 | Lcho_4171 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | PFAM: SNF2-related protein; helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: eba:ebA2413 helicase (SNF2 family). | 0.800 |
Lcho_0002 | polA | Lcho_0002 | Lcho_1062 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.998 |
Lcho_0002 | rpoA | Lcho_0002 | Lcho_3923 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.624 |
Lcho_0002 | rpoB | Lcho_0002 | Lcho_3867 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.619 |
Lcho_0002 | rpoC | Lcho_0002 | Lcho_3866 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.611 |
Lcho_4167 | Lcho_4168 | Lcho_4167 | Lcho_4168 | PFAM: type III restriction protein res subunit; KEGG: neu:NE2306 hypothetical protein. | KEGG: amt:Amet_3301 hypothetical protein. | 0.844 |
Lcho_4167 | Lcho_4169 | Lcho_4167 | Lcho_4169 | PFAM: type III restriction protein res subunit; KEGG: neu:NE2306 hypothetical protein. | PFAM: DNA methylase N-4/N-6 domain protein; KEGG: neu:NE2309 adenine specific DNA methylase Mod. | 0.949 |
Lcho_4167 | Lcho_4170 | Lcho_4167 | Lcho_4170 | PFAM: type III restriction protein res subunit; KEGG: neu:NE2306 hypothetical protein. | KEGG: tbd:Tbd_0934 hypothetical protein. | 0.952 |
Lcho_4167 | Lcho_4171 | Lcho_4167 | Lcho_4171 | PFAM: type III restriction protein res subunit; KEGG: neu:NE2306 hypothetical protein. | PFAM: SNF2-related protein; helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: eba:ebA2413 helicase (SNF2 family). | 0.973 |
Lcho_4167 | polA | Lcho_4167 | Lcho_1062 | PFAM: type III restriction protein res subunit; KEGG: neu:NE2306 hypothetical protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.894 |
Lcho_4167 | rpoA | Lcho_4167 | Lcho_3923 | PFAM: type III restriction protein res subunit; KEGG: neu:NE2306 hypothetical protein. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.906 |
Lcho_4167 | rpoB | Lcho_4167 | Lcho_3867 | PFAM: type III restriction protein res subunit; KEGG: neu:NE2306 hypothetical protein. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.906 |
Lcho_4167 | rpoC | Lcho_4167 | Lcho_3866 | PFAM: type III restriction protein res subunit; KEGG: neu:NE2306 hypothetical protein. | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.681 |
Lcho_4167 | rpoZ | Lcho_4167 | Lcho_0730 | PFAM: type III restriction protein res subunit; KEGG: neu:NE2306 hypothetical protein. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.905 |
Lcho_4168 | Lcho_4167 | Lcho_4168 | Lcho_4167 | KEGG: amt:Amet_3301 hypothetical protein. | PFAM: type III restriction protein res subunit; KEGG: neu:NE2306 hypothetical protein. | 0.844 |
Lcho_4168 | Lcho_4169 | Lcho_4168 | Lcho_4169 | KEGG: amt:Amet_3301 hypothetical protein. | PFAM: DNA methylase N-4/N-6 domain protein; KEGG: neu:NE2309 adenine specific DNA methylase Mod. | 0.818 |
Lcho_4168 | Lcho_4170 | Lcho_4168 | Lcho_4170 | KEGG: amt:Amet_3301 hypothetical protein. | KEGG: tbd:Tbd_0934 hypothetical protein. | 0.794 |
Lcho_4168 | Lcho_4171 | Lcho_4168 | Lcho_4171 | KEGG: amt:Amet_3301 hypothetical protein. | PFAM: SNF2-related protein; helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: eba:ebA2413 helicase (SNF2 family). | 0.832 |
Lcho_4169 | Lcho_4167 | Lcho_4169 | Lcho_4167 | PFAM: DNA methylase N-4/N-6 domain protein; KEGG: neu:NE2309 adenine specific DNA methylase Mod. | PFAM: type III restriction protein res subunit; KEGG: neu:NE2306 hypothetical protein. | 0.949 |