STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEB61505.1Protein of unknown function. (548 aa)    
Predicted Functional Partners:
SEB60879.1
Protein of unknown function.
 
    0.862
SEB62288.1
Protein of unknown function.
 
    0.862
SEB58502.1
Protein of unknown function.
 
    0.861
SEB59904.1
Protein of unknown function.
 
    0.861
SEB69057.1
Protein of unknown function.
 
    0.861
SEC42977.1
Protein of unknown function.
 
    0.861
SED10168.1
Periplasmic nitrate reductase subunit NapB.
 
    0.861
SED64979.1
Protein of unknown function.
 
    0.861
SEB61127.1
Photosynthesis system II assembly factor YCF48.
 
    0.827
SEB59946.1
Uncharacterized protein.
 
    0.825
Your Current Organism:
Pseudomonas mohnii
NCBI taxonomy Id: 395600
Other names: Arthrobacter sp. BDR2P2B2-M, CCUG 53115, DSM 18327, P. mohnii, Pseudomonas mohnii Camara et al. 2007, strain IpA-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.