STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEB82314.1Threonine dehydratase. (318 aa)    
Predicted Functional Partners:
SEC38403.1
Homoserine dehydrogenase.
  
 
 0.972
SEB74692.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
 0.861
SED03904.1
Acetolactate synthase, small subunit.
  
 
 0.807
SED54270.1
Cystathionine beta-synthase.
  
 
0.784
SED03879.1
Acetolactate synthase, large subunit.
 
 0.762
leuB
3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.
 
 
 0.753
SEC63309.1
Hydroxylysine kinase.
  
 
 0.747
SEC54508.1
Phosphoserine phosphatase.
    
 0.737
SEB88041.1
Threonine synthase.
  
 
 0.718
SEC38372.1
L-threonine synthase.
  
 
 0.718
Your Current Organism:
Pseudomonas mohnii
NCBI taxonomy Id: 395600
Other names: Arthrobacter sp. BDR2P2B2-M, CCUG 53115, DSM 18327, P. mohnii, Pseudomonas mohnii Camara et al. 2007, strain IpA-2
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