STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEB89840.1Predicted protein. (156 aa)    
Predicted Functional Partners:
SEB89879.1
Sulfite reductase (NADPH) flavoprotein alpha-component.
 
  
 0.944
SEB89919.1
Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.
 
    0.924
SEB89804.1
Hypothetical protein.
 
     0.908
SEB89734.1
Two-component system, OmpR family, sensor kinase.
 
     0.859
SED09131.1
Uncharacterized conserved protein, contains GH25 family domain.
  
  
 0.757
SEB89771.1
Two-component system, OmpR family, response regulator.
 
     0.683
SEB89957.1
Predicted Fe2+/Mn2+ transporter, VIT1/CCC1 family.
 
     0.682
SEC06317.1
Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.
 
    0.611
SEC36186.1
Putative iron-regulated protein.
   
    0.594
SEC36229.1
CxxC motif-containing protein, DUF1111 family.
   
    0.580
Your Current Organism:
Pseudomonas mohnii
NCBI taxonomy Id: 395600
Other names: Arthrobacter sp. BDR2P2B2-M, CCUG 53115, DSM 18327, P. mohnii, Pseudomonas mohnii Camara et al. 2007, strain IpA-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.