STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEB94600.1Putative NAD(P)H quinone oxidoreductase, PIG3 family. (332 aa)    
Predicted Functional Partners:
SEC67907.1
Amino acid adenylation domain-containing protein/thioester reductase domain-containing protein.
 
 
 0.844
SEC76032.1
Pyruvate carboxylase subunit B.
    
 0.764
SED09363.1
Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.754
SED62716.1
Acyl dehydratase.
  
 0.728
SED06863.1
PTS system D-fructose-specific IIB component (F1P-forming), Frc family /PTS system D-fructose-specific IIC component (F1P-forming), Frc family.
     
 0.727
SEC34742.1
NAD(P)H-flavin reductase.
  
 
 0.696
SEC57167.1
Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase.
  
 
 0.695
SEB60291.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
  
 0.674
SEB78273.1
Toluate 1,2-dioxygenase electron transfer component.
   
 
 0.654
SEC81429.1
CDP-4-dehydro-6-deoxyglucose reductase.
   
 
 0.654
Your Current Organism:
Pseudomonas mohnii
NCBI taxonomy Id: 395600
Other names: Arthrobacter sp. BDR2P2B2-M, CCUG 53115, DSM 18327, P. mohnii, Pseudomonas mohnii Camara et al. 2007, strain IpA-2
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