STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEB95605.1Phenol 2-monooxygenase. (631 aa)    
Predicted Functional Partners:
SEC80945.1
Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily.
   
 0.834
SED24371.1
Cytochrome P450.
  
 0.759
SEB95237.1
Hypothetical protein.
    
 0.725
SEC74701.1
Hypothetical protein.
    
 0.725
SEB96752.1
Ferredoxin-NADP reductase.
  
  
 0.723
SEB78273.1
Toluate 1,2-dioxygenase electron transfer component.
   
 
 0.698
SEC34742.1
NAD(P)H-flavin reductase.
   
 
 0.698
SEC81429.1
CDP-4-dehydro-6-deoxyglucose reductase.
   
 
 0.698
SEB63170.1
Cytochrome c, mono-and diheme variants.
     
 0.688
SEB61432.1
3-ketosteroid 9alpha-monooxygenase subunit B.
     
 0.687
Your Current Organism:
Pseudomonas mohnii
NCBI taxonomy Id: 395600
Other names: Arthrobacter sp. BDR2P2B2-M, CCUG 53115, DSM 18327, P. mohnii, Pseudomonas mohnii Camara et al. 2007, strain IpA-2
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