STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEB96630.1Two component transcriptional regulator, LuxR family. (223 aa)    
Predicted Functional Partners:
SEB96667.1
Two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX.
 
 0.989
SED41149.1
Two-component system, NarL family, sensor histidine kinase EvgS.
   
 0.988
SEC93101.1
PAS domain S-box-containing protein.
 
 0.979
SEB64599.1
Signal transduction histidine kinase.
   
 0.972
SED37945.1
Multi-sensor hybrid histidine kinase.
   
 0.935
SED38688.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Manually curated.
 
 0.932
SED72218.1
Signal transduction histidine kinase.
  
 0.930
SED60746.1
Two-component system, NarL family, sensor histidine kinase UhpB.
 
 0.929
SEC34159.1
Signal transduction histidine kinase.
 
 0.921
SEB96575.1
PAS fold-containing protein.
 
 
 0.915
Your Current Organism:
Pseudomonas mohnii
NCBI taxonomy Id: 395600
Other names: Arthrobacter sp. BDR2P2B2-M, CCUG 53115, DSM 18327, P. mohnii, Pseudomonas mohnii Camara et al. 2007, strain IpA-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.