STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC71001.1phospholipid/cholesterol/gamma-HCH transport system permease protein. (382 aa)    
Predicted Functional Partners:
SEC70905.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
 
 0.999
SEC70955.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 
 0.999
SED08859.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
 
 0.994
SED08790.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 
 0.993
SEC70870.1
Cholesterol transport system auxiliary component.
 
 
 0.976
SEC05732.1
Anti-anti-sigma factor.
   
  0.965
SEC18490.1
Anti-anti-sigma factor.
   
  0.965
SED08924.1
Phospholipid transport system transporter-binding protein.
  
 0.780
SED08891.1
Phospholipid transport system substrate-binding protein.
  
 
 0.748
SEC81631.1
Ribosome-dependent ATPase.
    
 0.676
Your Current Organism:
Pseudomonas mohnii
NCBI taxonomy Id: 395600
Other names: Arthrobacter sp. BDR2P2B2-M, CCUG 53115, DSM 18327, P. mohnii, Pseudomonas mohnii Camara et al. 2007, strain IpA-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.