STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC93746.1Hypothetical protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (266 aa)    
Predicted Functional Partners:
SEC67907.1
Amino acid adenylation domain-containing protein/thioester reductase domain-containing protein.
 
 
 0.876
SEC58484.1
Glutamate synthase (NADPH) large subunit.
    
  0.727
SED65077.1
3-oxoacyl-[acyl-carrier protein] reductase.
  
 
  0.717
SEC57167.1
Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase.
     
 0.702
SED19996.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
 
  0.698
SED63492.1
3-oxoacyl-[acyl-carrier protein] reductase.
  
 
  0.690
SEC93780.1
Uncharacterized membrane protein YhaH, DUF805 family.
       0.680
SEC93719.1
Histidine triad (HIT) family protein.
       0.624
SEB61213.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
 
  0.618
SEC03969.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
 
  0.602
Your Current Organism:
Pseudomonas mohnii
NCBI taxonomy Id: 395600
Other names: Arthrobacter sp. BDR2P2B2-M, CCUG 53115, DSM 18327, P. mohnii, Pseudomonas mohnii Camara et al. 2007, strain IpA-2
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