STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SED35127.1Glycosyl transferase family 2. (357 aa)    
Predicted Functional Partners:
SED35022.1
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family.
  
 
 0.841
SED35099.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    
0.839
SEB88603.1
Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase.
 
  
 0.812
arnA
UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating; Bifunctional enzyme that catalyzes the oxidative decarboxylation of UDP-glucuronic acid (UDP-GlcUA) to UDP-4-keto- arabinose (UDP-Ara4O) and the addition of a formyl group to UDP-4- amino-4-deoxy-L-arabinose (UDP-L-Ara4N) to form UDP-L-4-formamido- arabinose (UDP-L-Ara4FN). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides; In the N-terminal section; belongs to the Fmt family. UDP- L-Ara4N formyltransferase subfamily.
  
 
 0.808
SED34983.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.796
SED35060.1
3-hydroxybutyryl-CoA dehydratase.
       0.773
SED34914.1
Glycosyl transferase family 2.
 
     0.709
SEB95237.1
Hypothetical protein.
  
  
  0.648
SEC74701.1
Hypothetical protein.
  
  
  0.643
SED35206.1
Lipopolysaccharide transport system ATP-binding protein.
  
  
 0.639
Your Current Organism:
Pseudomonas mohnii
NCBI taxonomy Id: 395600
Other names: Arthrobacter sp. BDR2P2B2-M, CCUG 53115, DSM 18327, P. mohnii, Pseudomonas mohnii Camara et al. 2007, strain IpA-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.