STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SED55781.1Hypothetical protein. (200 aa)    
Predicted Functional Partners:
SED55712.1
Protein of unknown function.
 
  
 0.961
SED55749.1
Ferredoxin-NADP reductase.
 
   
 0.954
SEB96945.1
Aminomethyltransferase; Belongs to the GcvT family.
 
  
 0.943
SEB96787.1
Protein of unknown function.
 
  
 0.868
SEB96815.1
Aminomethyltransferase; Belongs to the GcvT family.
 
  
  0.851
SEB96752.1
Ferredoxin-NADP reductase.
 
   
 0.788
SEB96894.1
Trimethylamine monooxygenase.
 
     0.788
SEB97141.1
N-methylglutamate synthase subunit B.
 
     0.774
SEB97176.1
N-methylglutamate synthase subunit A.
 
     0.772
SEB97092.1
N-methylglutamate synthase subunit C precursor; Belongs to the glutamate synthase family.
  
     0.769
Your Current Organism:
Pseudomonas mohnii
NCBI taxonomy Id: 395600
Other names: Arthrobacter sp. BDR2P2B2-M, CCUG 53115, DSM 18327, P. mohnii, Pseudomonas mohnii Camara et al. 2007, strain IpA-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.