STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SED70601.1Uncharacterized damage-inducible protein DinB (forms a four-helix bundle). (193 aa)    
Predicted Functional Partners:
SED70569.1
Cell division protein ZapE.
       0.740
SEC26834.1
Aspartate kinase; Belongs to the aspartokinase family.
     
 0.592
SED11605.1
Gentisate 1,2-dioxygenase.
    
  0.579
SED70631.1
Acetyltransferase (GNAT) family protein.
  
    0.552
SED70539.1
Predicted oxidoreductase.
       0.502
SED71291.1
Predicted DNA-binding protein, MmcQ/YjbR family.
 
     0.470
SEB87728.1
TolB amino-terminal domain-containing protein.
  
     0.409
Your Current Organism:
Pseudomonas mohnii
NCBI taxonomy Id: 395600
Other names: Arthrobacter sp. BDR2P2B2-M, CCUG 53115, DSM 18327, P. mohnii, Pseudomonas mohnii Camara et al. 2007, strain IpA-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.