STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL42625.1PFAM: pentapeptide repeat protein; KEGG: ava:Ava_2678 pentapeptide repeat-containing protein. (162 aa)    
Predicted Functional Partners:
ACL45345.1
PFAM: pentapeptide repeat protein; KEGG: cyt:cce_3272 RfrA pentapeptide repeat-containing protein.
  
     0.769
ACL46414.1
PFAM: pentapeptide repeat protein; KEGG: amr:AM1_3083 pentapeptide repeat-containing protein.
  
     0.767
ACL44577.1
PFAM: pentapeptide repeat protein; KEGG: tel:tll0709 hypothetical protein.
  
     0.763
ACL46083.1
PFAM: pentapeptide repeat protein; KEGG: tel:tll0024 hypothetical protein.
  
     0.763
ACL47307.1
PFAM: pentapeptide repeat protein; KEGG: ana:all3114 hypothetical protein.
  
     0.763
ACL46503.1
PFAM: pentapeptide repeat protein; KEGG: tel:tll0282 hypothetical protein.
  
     0.762
ACL46507.1
PFAM: pentapeptide repeat protein; KEGG: cyb:CYB_2134 pentapeptide repeat-containing protein.
  
     0.762
ACL42869.1
PFAM: pentapeptide repeat protein; KEGG: ana:all3740 hypothetical protein.
  
     0.757
ACL46448.1
PFAM: pentapeptide repeat protein; KEGG: npu:Npun_F4955 pentapeptide repeat-containing protein.
  
     0.756
ACL46928.1
PFAM: pentapeptide repeat protein; KEGG: cyb:CYB_0443 pentapeptide repeat-containing protein.
  
     0.752
Your Current Organism:
Cyanothece sp. PCC7425
NCBI taxonomy Id: 395961
Other names: C. sp. PCC 7425, Cyanothece sp. ATCC 29141, Cyanothece sp. PCC 7425, Synechococcus sp. PCC 7425
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.