STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL42860.1PFAM: protein of unknown function DUF820; KEGG: ava:Ava_0100 hypothetical protein. (191 aa)    
Predicted Functional Partners:
ACL45912.1
PFAM: protein of unknown function DUF820; KEGG: amr:AM1_5162 hypothetical protein.
  
     0.625
ACL44856.1
PFAM: protein of unknown function DUF820; KEGG: amr:AM1_5162 hypothetical protein.
  
     0.597
ACL43277.1
PFAM: protein of unknown function DUF820; KEGG: cyt:cce_4530 hypothetical protein.
  
     0.586
ACL42859.1
KEGG: ana:all7109 hypothetical protein.
       0.545
ACL45772.1
PFAM: protein of unknown function DUF820; KEGG: syn:slr1613 hypothetical protein.
  
     0.530
ACL43494.1
PFAM: protein of unknown function DUF820; KEGG: npu:Npun_F2721 hypothetical protein.
  
     0.524
ACL45607.1
PFAM: protein of unknown function DUF820; KEGG: ava:Ava_3293 hypothetical protein.
  
     0.500
ACL44931.1
PFAM: protein of unknown function DUF820; KEGG: mar:MAE_60610 hypothetical protein.
  
     0.499
ACL44076.1
PFAM: protein of unknown function DUF820; KEGG: npu:Npun_R3517 hypothetical protein.
  
     0.486
ACL43265.1
PFAM: protein of unknown function DUF820; KEGG: ana:alr5021 hypothetical protein.
  
     0.478
Your Current Organism:
Cyanothece sp. PCC7425
NCBI taxonomy Id: 395961
Other names: C. sp. PCC 7425, Cyanothece sp. ATCC 29141, Cyanothece sp. PCC 7425, Synechococcus sp. PCC 7425
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.