STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACL42921.1PFAM: protein of unknown function UPF0027; KEGG: amr:AM1_4754 hypothetical protein. (393 aa)    
Predicted Functional Partners:
ACL42922.1
PFAM: band 7 protein; KEGG: tel:tlr2184 hypothetical protein.
  
   0.798
ACL42923.1
PFAM: protein of unknown function DUF107; KEGG: amr:AM1_3972 hypothetical protein.
       0.773
ACL42920.1
KEGG: gvi:glr0659 hypothetical protein.
  
    0.754
ACL46150.1
KEGG: npu:Npun_F6164 hypothetical protein.
  
    0.685
ACL46156.1
KEGG: mar:MAE_22410 hypothetical protein.
 
     0.543
ACL42919.1
PFAM: tyrosine protein kinase; Serine/threonine protein kinase-related; SMART: serine/threonine protein kinase; KEGG: npu:Npun_F3464 serine/threonine protein kinase.
       0.539
ACL42924.1
PFAM: cyclic nucleotide-binding; MscS Mechanosensitive ion channel; KEGG: tel:tlr1736 hypothetical protein.
       0.487
prfB
Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
  
  
 0.462
ACL46159.1
PFAM: CDP-alcohol phosphatidyltransferase; KEGG: mar:MAE_22470 CDP-alcohol phosphatidyltransferase.
 
     0.453
Your Current Organism:
Cyanothece sp. PCC7425
NCBI taxonomy Id: 395961
Other names: C. sp. PCC 7425, Cyanothece sp. ATCC 29141, Cyanothece sp. PCC 7425, Synechococcus sp. PCC 7425
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